DPARSF

Submitted by YAN Chao-Gan on

Data Processing Assistant for Resting-State fMRI (DPARSF) is a convenient plug-in software within DPABI, which is based on SPM. You just need to arrange your DICOM files, and click a few buttons to set parameters, DPARSF will then give all the preprocessed (slice timing, realign, normalize, smooth) data, functional connectivity, ReHo, ALFF/fALFF, degree centrality, voxel-mirrored homotopic connectivity (VMHC) results. DPARSF can also create a report for excluding subjects with excessive head motion and generate a set of pictures for easily checking the effect of normalization. You can use DPARSF to extract ROI time courses efficiently if you want to perform small-world analysis. DPARSF basic edition is very easy to use while DPARSF advanced edition (alias: DPARSFA) is much more flexible and powerful. DPARSFA can parallel the computation for each subject, and can be used to reorient your images interactively or define regions of interest interactively. You can skip or combine the processing steps in DPARSF advanced edition freely. As a component of DPABI, please add with subfolders for DPABI in MATLAB's path setting and enter "dpabi" in the command window to enjoy this powerful toolbox. DPARSF is available at http://rfmri.org/dpabi.

Keywords in DPARSF:

Working Directory

Subject List

Time Points

TR(s)

Template Parameters

EPI DICOM to NIfTI

Apply Mats

Remove First Time Points

Slice Timing

Realign

Voxel-Specific Head Motion

Reorient Fun*

Reorient T1*

AutoMask

T1DICOM to NIfTI

Crop T1

T1 Coreg to Fun

Segment

New Segment+DARTEL

Affine Regularisation in Segmentation

Nuisance Covariates Regression

Filter

Normalize

Smooth

Mask

ALFF

fALFF

Scrubbing

ReHo

Degree Centrality

Functional Connectivity

Extract ROI time courses

Define ROI

CWAS

VMHC

Normalize Derivatives

Smooth Derivatives

Parallel Workers

Functional Sessions

Starting Directory Name

Save

Load