DPARSFA Output File Summary

Submitted by Bin Lu on

As many users of DPARSFA were confused about the meaning of DPARSFA Output file, this summary was compiled according to the video on rfmri.org

DPARSFA_Autosaved_xxx -- DPARSFA setting log file.

FunRaw -- Raw functional images. 

FunImg -- Functional images in NIFTI format.

FunImgA -- This file contains the functional images after slice timing.

FunImgAR -- This file contains the functional images after realignment (correcting head motion using parameters in RealignParameter file).

FunImgARC -- This file contains the functional images after nuisance regression.

FunImgARCovs -- Covariates used in nuisance regression.

FunImgARCW -- This file contains the functional images after spatial normalization.

FunImgARCWF -- This file contains the functional images after filter.

FunImgARCWFsym -- This file contains the functional images after filter which are more symmetric.

FunImgARCWFsymS -- This file contains the functional images after smooth.

FunImgARglobal -- This file is exactly same as FunImgARglobal. And other files contain the ‘global’ word means the images have been executed global signal regression.

T1Raw -- Raw structural images.

T1Img -- Structure image in NIFTI format.

T1Coreg -- T1 images which have been co-registrated to functional images.

T1ImgNewSegment -- This file contains the T1 segment images.

Masks -- This file contains the masks created by DPARSFA .

PicturesForChkNormalization -- Pictures for checking normalization.

QC -- Quality control log file created by reorienting procedure.

RealignParameter -- This file contains the parameters used in realignment.

ReorientMats -- The log file of manually reorienting functional/T1 image. ( DPARSFA can use it to reorient image automatically if you rename it ‘DownloadedReorientMats’)

SymmetricGroupT1MeanTemplate --Group T1 templates after Symmetric.

Result -- Result images such as ALFF. ALFF_FunImgARCW contains ALFF images. ‘FunImgARCW’ index the preprocessing procedure.

TRInfo -- TR information extracted from raw data.