DPABI/DPABISurf/DPARSF

Question about wAutomask

Submitted by ly666 on

Dear all,

                Recently, I met some problems when I  used Dpabi for fMRI data preprocessing .

                1) Usually,after normalization,  error "Function 'subsindex' is not defined for values of class 'matlab.ui.Figure'." will be reported in matlab so that we couln't obtain PicturesForChkNormalization files. Our version of matlab is 2017b in Ubuntu 16.04, how do we work out this problem? Or what's recommend version  of matlab?

TDA information

Submitted by zuolonglotu@gm… on

Dear Prof. Yan,

The TDA module was performed to calculate the concordance (the dynamic metrics was calculated before, e.g. the alff+falff, reho, DC and GSCorr ) and the error information was as follows,

Calculating Functional Connectivity by Seed based Correlation Anlyasis finished, elapsed time: 23.6406 seconds.

Warning: Directory already exists.

> In DPABI_TDA_run at 228

  In DPABI_TDA>btnRun_Callback at 931

ANOVA报错与Mask问题

Submitted by HugoY on
1. 使用Dpabi中的统计分析进行ANOVA分析比较三组的FC差异
事后比较选择Tukey检定,正常的F.nii可以正常生成,但是事后比较出现付图的报错
后来有试着运行其他事后比较,Tukey和雪费都会报错但是Dunnet和Bonferroni可以运行,请问是下列报错是哪些地方操作错误了呢?
2.教学影片中有提到如果欲使用AlphaSim或是GRF等校正,需要选取MASK档案,但是我不知道这个Mask档案应该在哪个目录下,Masks目录下的AllresampledBrainMask没有任何内容又是正常的吗?
感谢老师的答覆

 

Error using y_ExtractROISignal (line 239)

Submitted by veeus18 on
Hell0,
I have 3 groups of subjects, and I am using a ROIList.mat file for all 3 groups. It works without issues for 2 groups. For the third, it gives below error. What does it mean?-
 
------------------------------
Error using y_ExtractROISignal (line 239)
An UndefinedFunction error was thrown on the workers for 'MaskROILabel'.  This might be because the file
containing 'MaskROILabel' is not accessible on the workers.

the criterion of remaining subjects,afeter scrubbing

Submitted by HermioneLin on

Dear all,

I want to use the data preprocessed to do the later analysis such as build a martix. But some subjects has limited timeseries when I finished scrubbing,which may result in a strange result. So I want to know how many time timeseries left in a subject( for my case ,the total time series are 180,first 5 were revoved at the very beginning part) is enough for further analysis.

Sincerely,

Lin

 

something wrong when using mutiple comparation correction in dpabi

Submitted by HermioneLin on

Dear all, 

I have troubling in using  the mutiple  comparation correction in stastical analysis in dpabi .  1.The pic1 shows the error when I was using PT with TECE . It still happened when I changed to the latest version of dpabi or using windows10 or mac system.

Normalize by dartel,what is the standard template?can i change it?

Submitted by lucy on

Hello pro Yan,

The article with data processed by dparsf was returned by the editor

And the reviewer asked us to re-do a rest-state analysis,and set the voxel size into 2*2*2 mm(3*3*3 previous by default) to map our activation analysis

Bur the results were strange and unreasonable

So i checked the normalize results,it seemed that i can not change the voxel size

Here are two normalized results for  one identical participate