DPABI/DPABISurf/DPARSF

Hi all,

I was wondering if anyone knows the slice order for ADNI resting state fMRI data? For entering into the slice order field in DPARSFA.

Thanks in advance

Hello

Hey,

I generated a 90% group mask and wanted to use the threshold coverage function to exclude subjects which have coverage less than 2*SD under the group mean overlap, like mentioned in the videos. The wAutoMask.nii files are all there, but the script seems to want a nii.gz file, because after selecting the group mask I get the following error:

Hi Chao-Gan,

When I did "NewSegment" in DPABI, the matlab always reported the same errors, which as follows:

What should I do to deal with this problem?

Thank you in advance!

Best,

Vincent

I am sorroy for so many questions I have. But I am stuck. I see a lot of Templates in DPABI. Could you please introduce the "WhiteMask_09_91x109x91",What is the probability of it? And what is the differents between "GreyMask_02_61x73x61" and "BrainMask_05_61x73x61"?

When I applied AlphaSim in dpabi. I found  the default Cluster connection radius is 18, which is different from AlphaSim in REST (rmm=5).  Is something wrong or both of them are correct?

Hello,

I'm trying to use the segmentation files (c2,c3) to extract the white matter and csf time series from my functional scans for use as a nuisance regressor. Segmentation worked fine, but when I go to do the ROI time series extraction with the segmentation masks, the following error occurs:

Can someone offer some advice, I'm a bit stuck.

Thanks

Is GRF correction in DPABI different with REST Viewer? I applied GRF correction and found positive results using REST viewer, but when I using DPABI to confirm, no cluster was shown. Why is this? And how to address this problem? Thank you!