The R-fMRI Maps Project: Download Data

Submitted by YAN Chao-Gan on

The R-fMRI Maps Project Data Release 200724 (Please see the data structure from here).

1. RMP Rumination fMRI Dataset (Chen et al., 2020). Please visit http://rfmri.org/RuminationfMRIData

 

The R-fMRI Maps Project Data Release 190330 (Please see the data structure from here).

2. REST-meta-MDD (Yan et al., 2019) data. Please visit http://rfmri.org/REST-meta-MDD. 

 

3. Beijing EOEC1 (Liu et al., 2013) data. We have released a list of R-fMRI indices for 48 participants with eyes-open and eyes-closed conditions (phenotypic data available here). 

Or use FTP software: Host: lab.rfmri.org Username: ftpdownload Password: FTPDownload Path: /sharing/RfMRIMaps/Beijing_EOEC/Beijing_EOEC1.tar.gz

 

4. Beijing EOEC2 (Yan et al., 2009; Zou et al., 2009) data. We have released a list of R-fMRI indices for 20 participants with eyes-open and eyes-closed conditions (phenotypic data available here). 

Or use FTP software: Host: lab.rfmri.org Username: ftpdownload Password: FTPDownload Path: /sharing/RfMRIMaps/Beijing_EOEC/Beijing_EOEC2.tar.gz

 

The R-fMRI Maps Project Data Release 170112 (Please see the data structure from here).

5. Autism Brain Imaging Data Exchange II (ABIDE II) (Di Martino et al., 2014) data. We have released a list of R-fMRI indices for 1043 participants (phenotypic data available here). Of note, there are additional 38 participants have longitudinal data (phenotypic data available here).

Or use FTP software: Host: lab.rfmri.org Username: ftpdownload Password: FTPDownload Path: /sharing/RfMRIMaps/ABIDE2/

 

The R-fMRI Maps Project Data Release 160616 (Please see the data structure from here).

6. Attention Deficit Hyperactivity Disorder 200 Sample (ADHD-200) (ADHD-200-Consortium, 2012) data. We have released a list of R-fMRI indices for 876 participants (phenotypic data available here).

Or use FTP software: Host: lab.rfmri.org Username: ftpdownload Password: FTPDownload Path: /sharing/RfMRIMaps/ADHD200/

 

The R-fMRI Maps Project Data Release 160410 (Please see the data structure from here).

7. 1000 Functional Connectomes Project (FCP) (Biswal et al., 2010) data. We have released a list of R-fMRI indices for 895 participants (phenotypic data available here).

Or use FTP software: Host: lab.rfmri.org Username: ftpdownload Password: FTPDownload Path: /sharing/RfMRIMaps/FCP

 

8. Autism Brain Imaging Data Exchange (ABIDE) (Di Martino et al., 2014) data. We have released a list of R-fMRI indices for 1102 participants (phenotypic data available here).

Or use FTP software: Host: lab.rfmri.org Username: ftpdownload Password: FTPDownload Path: /sharing/RfMRIMaps/ABIDE/

 

9. Consortium for Reliability and Reproducibility (CoRR) (Zuo et al., 2014) data. We have released 3 kinds of test-retest data.

9.1. Within Session test-retest: scan repeated on same day. We have released a list of R-fMRI indices for 168 participants (phenotypic data available here, phenotypic data missing for IPCAS_7_0026101, IPCAS_7_0026117 and SWU_3_0027175).

9.2. Between Session test-retest: Scan repeated one or more days later. We have released a list of R-fMRI indices for 550 participants (phenotypic data available here, phenotypic data missing for IPCAS_2_0025545).

9.3. HNU CCBD 10 Repetitions (Chen et al., 2015): 300 MRI sessions from 30 healthy participants who were scanned every three days for one month. We have released a list of R-fMRI indices for all the 30 participants (phenotypic data available here).

Or use FTP software: Host: lab.rfmri.org Username: ftpdownload Password: FTPDownload Path: /sharing/RfMRIMaps/CORR

 

References

ADHD-200-Consortium, 2012. The ADHD-200 Consortium: A Model to Advance the Translational Potential of Neuroimaging in Clinical Neuroscience. Front Syst Neurosci 6, 62.

Biswal, B.B., Mennes, M., Zuo, X.N., Gohel, S., Kelly, C., Smith, S.M., Beckmann, C.F., Adelstein, J.S., Buckner, R.L., Colcombe, S., Dogonowski, A.M., Ernst, M., Fair, D., Hampson, M., Hoptman, M.J., Hyde, J.S., Kiviniemi, V.J., Kotter, R., Li, S.J., Lin, C.P., Lowe, M.J., Mackay, C., Madden, D.J., Madsen, K.H., Margulies, D.S., Mayberg, H.S., McMahon, K., Monk, C.S., Mostofsky, S.H., Nagel, B.J., Pekar, J.J., Peltier, S.J., Petersen, S.E., Riedl, V., Rombouts, S.A., Rypma, B., Schlaggar, B.L., Schmidt, S., Seidler, R.D., G, J.S., Sorg, C., Teng, G.J., Veijola, J., Villringer, A., Walter, M., Wang, L., Weng, X.C., Whitfield-Gabrieli, S., Williamson, P., Windischberger, C., Zang, Y.F., Zhang, H.Y., Castellanos, F.X., Milham, M.P., 2010. Toward discovery science of human brain function. Proc Natl Acad Sci U S A 107, 4734-4739.

Chen, B., Xu, T., Zhou, C., Wang, L., Yang, N., Wang, Z., Dong, H.M., Yang, Z., Zang, Y.F., Zuo, X.N., Weng, X.C., 2015. Individual Variability and Test-Retest Reliability Revealed by Ten Repeated Resting-State Brain Scans over One Month. PLoS ONE 10, e0144963.

Di Martino, A., Yan, C.G., Li, Q., Denio, E., Castellanos, F.X., Alaerts, K., Anderson, J.S., Assaf, M., Bookheimer, S.Y., Dapretto, M., Deen, B., Delmonte, S., Dinstein, I., Ertl-Wagner, B., Fair, D.A., Gallagher, L., Kennedy, D.P., Keown, C.L., Keysers, C., Lainhart, J.E., Lord, C., Luna, B., Menon, V., Minshew, N.J., Monk, C.S., Mueller, S., Muller, R.A., Nebel, M.B., Nigg, J.T., O'Hearn, K., Pelphrey, K.A., Peltier, S.J., Rudie, J.D., Sunaert, S., Thioux, M., Tyszka, J.M., Uddin, L.Q., Verhoeven, J.S., Wenderoth, N., Wiggins, J.L., Mostofsky, S.H., Milham, M.P., 2014. The autism brain imaging data exchange: towards a large-scale evaluation of the intrinsic brain architecture in autism. Mol Psychiatry 19, 659-667.

Liu, D., Dong, Z., Zuo, X., Wang, J., Zang, Y., 2013. Eyes-open/eyes-closed dataset sharing for reproducibility evaluation of resting state fMRI data analysis methods. Neuroinformatics 11, 469-476.

Yan, C., Liu, D., He, Y., Zou, Q., Zhu, C., Zuo, X., Long, X., Zang, Y., 2009. Spontaneous brain activity in the default mode network is sensitive to different resting-state conditions with limited cognitive load. PLoS ONE 4, e5743.

Zou, Q., Long, X., Zuo, X., Yan, C., Zhu, C., Yang, Y., Liu, D., He, Y., Zang, Y., 2009. Functional connectivity between the thalamus and visual cortex under eyes closed and eyes open conditions: A resting-state fMRI study. Hum Brain Mapp 30, 3066-3078.

Zuo, X.-N., Anderson, J.S., Bellec, P., Birn, R.M., Biswal, B.B., Blautzik, J., Breitner, J.C.S., Buckner, R.L., Calhoun, V.D., Castellanos, F.X., Chen, A., Chen, B., Chen, J., Chen, X., Colcombe, S.J., Courtney, W., Craddock, R.C., Di Martino, A., Dong, H.-M., Fu, X., Gong, Q., Gorgolewski, K.J., Han, Y., He, Y., He, Y., Ho, E., Holmes, A., Hou, X.-H., Huckins, J., Jiang, T., Jiang, Y., Kelley, W., Kelly, C., King, M., LaConte, S.M., Lainhart, J.E., Lei, X., Li, H.-J., Li, K., Li, K., Lin, Q., Liu, D., Liu, J., Liu, X., Liu, Y., Lu, G., Lu, J., Luna, B., Luo, J., Lurie, D., Mao, Y., Margulies, D.S., Mayer, A.R., Meindl, T., Meyerand, M.E., Nan, W., Nielsen, J.A., O’Connor, D., Paulsen, D., Prabhakaran, V., Qi, Z., Qiu, J., Shao, C., Shehzad, Z., Tang, W., Villringer, A., Wang, H., Wang, K., Wei, D., Wei, G.-X., Weng, X.-C., Wu, X., Xu, T., Yang, N., Yang, Z., Zang, Y.-F., Zhang, L., Zhang, Q., Zhang, Z., Zhang, Z., Zhao, K., Zhen, Z., Zhou, Y., Zhu, X.-T., Milham, M.P., 2014. An open science resource for establishing reliability and reproducibility in functional connectomics. Scientific Data 1.